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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17910444_17911710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17910444 - 17911710

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTGC

5'SS Class:

major

3'SS Sequence:

TTCATTGTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTTTTCATT

Flanking Amino Acid:

LIGEIFELRGMFKWVRKTLI

Intron Amino Acid Position:

734

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

66.9

Major BPS

100

1.24

0.5

100

Major PPT

76.6

0.6

0.9

69.2

41.7

Minor 5ss

45.9

-0.4

2.8

59.2

39.8

Minor BPS

60.6

0.42

1.7

78.3

39.3

Associated Gene:

Gene:

SNX25

Ensembl Gene ID:

ENSAPLG00000010977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011461

17838589 - 17916373

77785

ENSAPLT00000047301

17841184 - 17916373

75190