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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17911778_17913458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17911778 - 17913458

Intron Length:

1681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CACTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CCTTCCACACTT

Flanking Amino Acid:

VQVTFGRTINKQIRDTVHWI

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

80.7

0.69

0.8

76.5

31.7

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

45.7

-0.2

2.1

64.6

46.2

Associated Gene:

Gene:

SNX25

Ensembl Gene ID:

ENSAPLG00000010977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047301

17841184 - 17916373

75190

ENSAPLT00000011461

17838589 - 17916373

77785