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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17976397_17977206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17976397 - 17977206

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TGTTTCCATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTCTTGTAATT

Flanking Amino Acid:

PQCDKCGSGILGTVVKARDK

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.1

40.1

Major BPS

0.82

0.8

24.9

Major PPT

75.5

0.57

0.9

70.4

35.4

Minor 5ss

44.8

-0.6

2.9

68.2

42.5

Minor BPS

57.5

0.31

80.3

36.2

Associated Gene:

Gene:

PDLIM3

Ensembl Gene ID:

ENSAPLG00000009922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019244

17976144 - 17997384

21241

ENSAPLT00000010349

17976144 - 17997384

21241