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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17978553_17981529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17978553 - 17981529

Intron Length:

2977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTAGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCGATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

ACTGCTTTATCT

Flanking Amino Acid:

STALGETPIMSDPAPTAVPQ

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

64.2

0.32

57.1

37.7

Minor 5ss

35.2

-1.7

2.7

43.3

43.5

Minor BPS

0.36

1.7

73.56

43.9

Associated Gene:

Gene:

PDLIM3

Ensembl Gene ID:

ENSAPLG00000009922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010349

17976144 - 17997384

21241

ENSAPLT00000019244

17976144 - 17997384

21241