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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17985690_17991104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17985690 - 17991104

Intron Length:

5415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTATCACGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAC

U12 Branch Point Sequence:

CTTTGTGTATTT

Flanking Amino Acid:

FKINLEAEPQEFKPIGTAHN

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

0.4

1.1

69.4

35.8

Major PPT

68.7

0.42

61.8

38.8

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

43.2

-0.4

2.5

66.47

45.5

Associated Gene:

Gene:

PDLIM3

Ensembl Gene ID:

ENSAPLG00000009922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030109

17981699 - 17997384

15686

ENSAPLT00000019244

17976144 - 17997384

21241