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Intron Name: Anas_platyrhynchos_platyrhynchos_4_17993064_17997291_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17993064 - 17997291

Intron Length:

4228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTACC

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAA

U12 Branch Point Sequence:

TGCAATTTAAGT

Flanking Amino Acid:

DFNQPLIITRITPGSKASAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.9

40.9

Major BPS

70.7

0.51

0.9

61.7

35.7

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

35.5

-1.6

2.8

38.3

39.6

Minor BPS

49.1

0.02

1.9

66.13

44.4

Associated Gene:

Gene:

PDLIM3

Ensembl Gene ID:

ENSAPLG00000009922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030109

17981699 - 17997384

15686

ENSAPLT00000019244

17976144 - 17997384

21241

ENSAPLT00000010349

17976144 - 17997384

21241