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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18232295_18233141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18232295 - 18233141

Intron Length:

847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATGATT

Flanking Amino Acid:

VKNDPFKTLENLNILDLTHN

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.1

0.74

0.8

77.6

30.4

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

62.2

0.47

1.5

82.94

31.9

Associated Gene:

Gene:

TLR3

Ensembl Gene ID:

ENSAPLG00000008976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033785

18229435 - 18237536

8102

ENSAPLT00000009346

18231846 - 18238836

6991