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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18233334_18234903_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18233334 - 18234903

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAG

U12 Branch Point Sequence:

CCTTGCTTAGGC

Flanking Amino Acid:

LDLSSNPLKEFHTGCLRAIG

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

75.5

40.6

Major BPS

52.3

0.06

1.6

51.4

Major PPT

85.6

0.8

0.6

84.6

23.2

Minor 5ss

33.8

-1.8

3.3

46.8

Minor BPS

-0.3

2.2

57.36

47.5

Associated Gene:

Gene:

TLR3

Ensembl Gene ID:

ENSAPLG00000008976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033785

18229435 - 18237536

8102

ENSAPLT00000009346

18231846 - 18238836

6991