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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18236730_18237307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18236730 - 18237307

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTTGTCTTATTT

Flanking Amino Acid:

EHLLKDPWCKKFKVYHAVQQ

Intron Amino Acid Position:

820

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.9

33.7

Major BPS

0.3

62.3

30.4

Major PPT

84.1

0.77

0.8

81.8

35.3

Minor 5ss

31.4

-2.1

2.7

33.6

35.4

Minor BPS

65.2

0.56

1.7

82.89

39.2

Associated Gene:

Gene:

TLR3

Ensembl Gene ID:

ENSAPLG00000008976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033785

18229435 - 18237536

8102

ENSAPLT00000009346

18231846 - 18238836

6991