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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18257867_18259148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18257867 - 18259148

Intron Length:

1282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTCTCTCTCACT

Flanking Amino Acid:

ADWVERSLHLRVIGKQLLSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

72.7

0.56

30.1

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

0.27

2.1

80.09

42.2

Associated Gene:

Gene:

FAM149A

Ensembl Gene ID:

ENSAPLG00000008657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035974

18257781 - 18267163

9383

ENSAPLT00000009018

18257781 - 18267163

9383