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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18265290_18265980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18265290 - 18265980

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTAATTCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTCTCTTTAATT

Flanking Amino Acid:

LSVPRLQQTYHRGRYAYSRV

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

79.5

0.66

0.9

77.5

36.5

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

76.8

0.92

1.2

82.98

39.3

Associated Gene:

Gene:

FAM149A

Ensembl Gene ID:

ENSAPLG00000008657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035974

18257781 - 18267163

9383

ENSAPLT00000009018

18257781 - 18267163

9383