Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_18282274_18283687_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18282274 - 18283687

Intron Length:

1414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCAAAG

5'SS Class:

major

3'SS Sequence:

TCTGGACCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

GTCTCTGTAAAT

Flanking Amino Acid:

REEVDTFMFEGHDTTAASMN

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.7

43.6

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

0.36

0.9

55.7

40.4

Minor 5ss

37.3

-1.4

3.1

48.6

47.1

Minor BPS

52.7

0.16

2.1

73.53

43.4

Associated Gene:

Gene:

CYP4V2

Ensembl Gene ID:

ENSAPLG00000007869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008204

18273647 - 18287126

13480