Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_18298608_18299172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18298608 - 18299172

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAATACA

5'SS Class:

major

3'SS Sequence:

CTTTATCACTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TATTCTTTATCA

Flanking Amino Acid:

ASKTFHNESFREKCFLKHTR

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

74.3

35.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

75.8

0.58

0.9

73.9

35.5

Minor 5ss

35.9

-1.6

2.8

44.1

43.3

Minor BPS

72.6

0.71

1.5

80.45

35.3

Associated Gene:

Gene:

F11

Ensembl Gene ID:

ENSAPLG00000007257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018231

18294433 - 18308211

13779

ENSAPLT00000007554

18294433 - 18309243

14811