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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18303644_18305563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18303644 - 18305563

Intron Length:

1920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

GTGCCACAGACT

Flanking Amino Acid:

WILTAAHCFMSRQNPNIWRV

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

55.9

0.15

1.2

Major PPT

92.5

0.96

0.6

92.6

17.3

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

41.2

-0.6

2.1

59.71

43.3

Associated Gene:

Gene:

F11

Ensembl Gene ID:

ENSAPLG00000007257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018231

18294433 - 18308211

13779

ENSAPLT00000007554

18294433 - 18309243

14811