Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_1831192_1848491_F

Intron Information:

Intron Rank:

132053

Intron Class:

major

Intron Phase:

Intron Coordinates:

1831192 - 1848491

Intron Length:

17300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTCACCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GTCTTTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

23.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.36

0.9

59.3

36.6

Minor 5ss

37.3

-1.4

46.9

48.4

Minor BPS

64.5

0.54

1.2

74.37

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031190

1831062 - 1852688

21627