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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18346325_18352221_F

Intron Information:

Intron Rank:

149244

Intron Class:

major

Intron Phase:

Intron Coordinates:

18346325 - 18352221

Intron Length:

5897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GGTGCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TTCCACTGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

65.3

0.35

1.1

57.9

43.1

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

49.4

0.03

71.51

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041636

18341502 - 18352770

11269