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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18565158_18608372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18565158 - 18608372

Intron Length:

43215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

ATTTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATATTTATTT

Flanking Amino Acid:

VYRNKKLRNAGNIFVVSLAI

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

1.1

61.8

43.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.8

0.83

0.8

81.4

35.3

Minor 5ss

37.2

-1.5

3.4

50.7

Minor BPS

58.5

0.35

1.7

77.58

39.2

Associated Gene:

Gene:

MTNR1A

Ensembl Gene ID:

ENSAPLG00000009307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009684

18564216 - 18608853

44638