Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_18629961_18631470_F

Intron Information:

Intron Rank:

137760

Intron Class:

major

Intron Phase:

Intron Coordinates:

18629961 - 18631470

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GACCTCTCATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAC

U12 Branch Point Sequence:

TCTTCCACAGTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

62.5

0.31

1.2

54.8

42.1

Major PPT

61.5

0.26

0.9

59.6

36.5

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

47.8

-0.1

64.63

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030510

18627566 - 18632343

4778