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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18644974_18650669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18644974 - 18650669

Intron Length:

5696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCACTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCTTTTTTAAAA

Flanking Amino Acid:

SFQSESCDDNGYHWDTSDWM

Intron Amino Acid Position:

4545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

76.1

34.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.7

0.9

77.2

36.7

Minor 5ss

34.1

-1.8

2.9

38.7

41.6

Minor BPS

64.8

0.46

1.4

68.55

37.9

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048067

18643981 - 18751117

107137