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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18645975_18650669_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18645975 - 18650669

Intron Length:

4695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGCCAACTAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATTC

Flanking Amino Acid:

SFQSESCDDNESFAVPDLSN

Intron Amino Acid Position:

4383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

76.1

34.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

55.5

0.13

1.1

53.4

34.7

Minor 5ss

34.1

-1.8

2.9

38.7

41.6

Minor BPS

52.3

0.05

1.8

65.67

40.8

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000042875

18643981 - 18752242

108262