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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18648652_18650669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18648652 - 18650669

Intron Length:

2018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TACCTTTTACAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

SFQSESCDDNASVVTVIHLV

Intron Amino Acid Position:

4406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

76.1

34.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.5

0.33

1.1

64.5

40.2

Minor 5ss

34.1

-1.8

2.9

38.7

41.6

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558