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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18650808_18651147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18650808 - 18651147

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

QKPSWDFDYDTKVVDLDPCL

Intron Amino Acid Position:

4360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

69.6

41.1

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

37.4

-1.4

3.1

55.3

42.7

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262