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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18651780_18653516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18651780 - 18653516

Intron Length:

1737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TATTTCTTTACT

Flanking Amino Acid:

CECEAGFRGERCLTDVDECT

Intron Amino Acid Position:

4149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.7

1.05

0.6

92.2

16.3

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

65.3

0.35

61.9

39.9

Minor 5ss

33.9

-1.8

2.8

41.8

44.8

Minor BPS

74.6

0.86

1.5

88.74

35.7

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558