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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18657416_18661626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18657416 - 18661626

Intron Length:

4211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAC

5'SS Class:

strong_major

3'SS Sequence:

CATCTTCCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CTGTCCTCATCT

Flanking Amino Acid:

VRDHYLLHVKVTDNGKPPLS

Intron Amino Acid Position:

3541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.1

34.3

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

68.4

0.41

0.9

67.6

33.4

Minor 5ss

36.8

-1.5

3.3

49.4

47.1

Minor BPS

58.4

0.34

1.9

76.02

46.4

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262