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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18665121_18667055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18665121 - 18667055

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGAT

5'SS Class:

major

3'SS Sequence:

TTTTCTCCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTTCTCCAATA

Flanking Amino Acid:

HGKFSIESTTGAIFIIESLD

Intron Amino Acid Position:

3309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

75.1

35.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

77.7

0.62

0.8

74.9

28.9

Minor 5ss

37.6

-1.4

3.5

55.7

48.5

Minor BPS

58.9

0.28

1.8

76.28

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558