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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18667446_18668790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18667446 - 18668790

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCAAAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTTTTCAAAA

Flanking Amino Acid:

TRVQATDADAGMNRKIHYSL

Intron Amino Acid Position:

3179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

83.5

35.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

70.8

0.47

64.2

40.5

Minor 5ss

0.17

2.5

74.6

41.7

Minor BPS

52.2

0.07

1.6

62.68

37.6

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558