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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18669025_18670305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18669025 - 18670305

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATG

5'SS Class:

strong_major

3'SS Sequence:

TATCTGTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CTTGTATTAACT

Flanking Amino Acid:

AEKFGLTPDTGELKTLMPLD

Intron Amino Acid Position:

3101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

77.4

37.4

Major BPS

81.9

0.79

0.8

81.9

Major PPT

78.4

0.64

0.9

72.7

37.3

Minor 5ss

37.2

-1.5

49.1

46.7

Minor BPS

63.4

0.5

1.7

80.31

41.8

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558