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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18679049_18679263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18679049 - 18679263

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATAAG

5'SS Class:

major

3'SS Sequence:

CTAATTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTAGTGATAATT

Flanking Amino Acid:

TMNQHILTVMVRDQDVPVKR

Intron Amino Acid Position:

1558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

37.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

76.1

0.59

72.9

41.9

Minor 5ss

34.6

-1.8

2.8

38.6

40.9

Minor BPS

45.8

-0.2

2.3

68.84

42.5

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558