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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18688748_18690886_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18688748 - 18690886

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTGAGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTGGCTGAGCC

Flanking Amino Acid:

LGTPLWFDITGDKLASEVFY

Intron Amino Acid Position:

1396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

73.4

43.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

57.6

0.17

1.2

50.8

47.2

Minor 5ss

35.4

-1.7

3.2

40.5

45.5

Minor BPS

47.8

-0.1

2.2

67.11

44.4

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041409

18643981 - 18744538

100558

ENSAPLT00000007052

18643981 - 18744538

100558