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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18691098_18691621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18691098 - 18691621

Intron Length:

524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTCAA

5'SS Class:

major

3'SS Sequence:

GTCTGTTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTAGCCTAAAA

Flanking Amino Acid:

SAAREYDILSIKAVDNGRPQ

Intron Amino Acid Position:

1326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

63.6

38.1

Major BPS

79.2

0.73

75.3

39.4

Major PPT

77.5

0.62

0.9

71.4

38.4

Minor 5ss

-2.2

2.9

44.5

Minor BPS

46.6

-0.2

2.2

63.41

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558