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Intron Name: Anas_platyrhynchos_platyrhynchos_4_18695535_18716457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18695535 - 18716457

Intron Length:

20923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TATTCTTTTATG

Flanking Amino Acid:

QGFFSINPKTGLITTTSRKL

Intron Amino Acid Position:

1195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.9

0.81

0.9

80.1

37.1

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

63.2

0.27

1.7

68.01

40.3

Associated Gene:

Gene:

FAT1

Ensembl Gene ID:

ENSAPLG00000006720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037595

18643981 - 18744538

100558

ENSAPLT00000048067

18643981 - 18751117

107137

ENSAPLT00000036488

18643981 - 18751117

107137

ENSAPLT00000042875

18643981 - 18752242

108262

ENSAPLT00000032133

18649683 - 18751117

101435

ENSAPLT00000042765

18643981 - 18751117

107137

ENSAPLT00000007052

18643981 - 18744538

100558

ENSAPLT00000041409

18643981 - 18744538

100558