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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19085274_19089013_F

Intron Information:

Intron Rank:

133017

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19085274 - 19089013

Intron Length:

3740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGTGCTA

5'SS Class:

weak_major

3'SS Sequence:

TATTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GGATATTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.3

54.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

90.4

0.91

0.7

88.7

27.9

Minor 5ss

29.4

-2.4

3.4

39.2

Minor BPS

55.8

0.26

1.6

69.21

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032160

19085090 - 19090595

5506