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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19800497_19802108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19800497 - 19802108

Intron Length:

1612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TTTTGTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ACTCCATTAACT

Flanking Amino Acid:

EDAEEQLDIVGNWWAVSNFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

57.9

41.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

83.8

0.76

0.8

82.4

Minor 5ss

31.7

-2.1

3.3

41.6

45.3

Minor BPS

68.4

0.66

1.6

81.49

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008092

19799194 - 19807166

7973