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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19847291_19847406_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19847291 - 19847406

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTTGC

5'SS Class:

major

3'SS Sequence:

ATCCGTTACAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

TTATCTAGAATT

Flanking Amino Acid:

LPLKLAVYSEADLMKKIASE

Intron Amino Acid Position:

1986

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

66.2

40.6

Major BPS

59.2

0.23

1.3

43.5

Major PPT

55.6

0.13

1.1

55.6

37.8

Minor 5ss

39.5

-1.2

53.6

43.4

Minor BPS

58.3

0.34

1.7

78.84

37.2

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000035925

19845623 - 19882739

37117