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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19847500_19847711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19847500 - 19847711

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTACGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTATTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAACA

Flanking Amino Acid:

TESPVLVNEYEAGSGNISQK

Intron Amino Acid Position:

1955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

80.2

34.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.1

0.79

0.9

81.9

33.5

Minor 5ss

40.7

-1

3.1

55.2

42.4

Minor BPS

78.3

0.88

1.4

88.34

28.1

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117