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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19849005_19849828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19849005 - 19849828

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCACCA

5'SS Class:

major

3'SS Sequence:

ACCTTTTCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTGTTCTAATT

Flanking Amino Acid:

SSETATENEQTPNQELNKTK

Intron Amino Acid Position:

1845

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.2

57.9

41.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.6

0.44

0.9

66.1

33.9

Minor 5ss

43.9

-0.7

2.8

46.1

Minor BPS

51.7

0.13

1.8

71.16

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000046825

19839698 - 19882739

43042

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117