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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19856278_19856523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19856278 - 19856523

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCACA

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTAACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TCTATTTTAACA

Flanking Amino Acid:

FQGATAAKLEGPSTSECLSA

Intron Amino Acid Position:

1573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.3

37.4

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

60.8

0.24

1.2

61.6

42.7

Minor 5ss

45.8

-0.4

2.5

58.4

45.9

Minor BPS

71.3

0.66

1.2

75.15

36.6

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000046825

19839698 - 19882739

43042

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117