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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19856662_19856989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19856662 - 19856989

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTAAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTCTAAATA

Flanking Amino Acid:

HFEPFATDDLGNTVIHLDQA

Intron Amino Acid Position:

1527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

73.4

43.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

66.6

0.37

60.3

39.1

Minor 5ss

35.4

-1.7

3.2

40.5

45.5

Minor BPS

66.4

0.51

1.6

75.44

36.3

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000046825

19839698 - 19882739

43042

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117