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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19857111_19857728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19857111 - 19857728

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CGATGTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TGCTCTGTATTC

Flanking Amino Acid:

PSESLASTDDETFDKNFPTE

Intron Amino Acid Position:

1487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

72.3

0.5

0.9

69.4

41.5

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

46.1

-0.3

2.2

58.07

41.8

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000046825

19839698 - 19882739

43042

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117