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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19857858_19857943_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19857858 - 19857943

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTTATA

Flanking Amino Acid:

LRQRALYALQDIVTRHLSEN

Intron Amino Acid Position:

1444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.3

37.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.1

0.86

0.8

80.9

36.4

Minor 5ss

45.8

-0.4

2.5

58.4

45.9

Minor BPS

60.3

0.32

1.6

69.65

37.1

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000046825

19839698 - 19882739

43042

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117

ENSAPLT00000037827

19845623 - 19882739

37117