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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19858117_19860117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19858117 - 19860117

Intron Length:

2001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTTT

5'SS Class:

major

3'SS Sequence:

TTTTCTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ATGTCAAGAACT

Flanking Amino Acid:

KYSRSTEMSSETGSDLSMFE

Intron Amino Acid Position:

1406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

74.1

36.8

Major BPS

78.2

0.7

77.9

32.1

Major PPT

0.9

0.6

84.8

23.1

Minor 5ss

48.8

-0.1

3.1

73.2

43.6

Minor BPS

49.5

0.04

74.13

41.8

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043835

19845623 - 19882739

37117

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000033728

19845623 - 19882739

37117