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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19861165_19861816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19861165 - 19861816

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGATT

5'SS Class:

major

3'SS Sequence:

TTTTTGATGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCTTTTTGATG

Flanking Amino Acid:

SSPSNGAEKTRSHRQPEEEV

Intron Amino Acid Position:

1196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

77.1

37.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

65.6

0.35

1.2

68.7

41.1

Minor 5ss

44.4

-0.6

3.2

66.1

45.1

Minor BPS

63.2

0.27

1.3

64.87

38.1

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000046825

19839698 - 19882739

43042