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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19873733_19876119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19873733 - 19876119

Intron Length:

2387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGGA

5'SS Class:

major

3'SS Sequence:

TCTGCATGCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CCTCCTTTATCT

Flanking Amino Acid:

EQAIAVMDDSVVTETTGSVS

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

66.8

38.7

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

66.4

0.37

57.8

42.2

Minor 5ss

38.3

-1.3

3.1

46.2

44.4

Minor BPS

59.5

0.38

1.7

72.72

44.5

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037827

19845623 - 19882739

37117

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000046825

19839698 - 19882739

43042

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000008891

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117