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Intron Name: Anas_platyrhynchos_platyrhynchos_4_19879724_19879908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19879724 - 19879908

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

TGAAATATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TAGCTCTTGATT

Flanking Amino Acid:

SYLKFLQKMLARENEEEDVR

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

73.5

37.9

Major BPS

83.8

0.84

73.6

41.8

Major PPT

68.2

0.41

1.1

63.2

46.5

Minor 5ss

46.4

-0.4

2.8

64.2

41.3

Minor BPS

63.2

0.5

1.2

72.66

38.5

Associated Gene:

Gene:

PCM1

Ensembl Gene ID:

ENSAPLG00000008474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035925

19845623 - 19882739

37117

ENSAPLT00000033728

19845623 - 19882739

37117

ENSAPLT00000045600

19845623 - 19882739

37117

ENSAPLT00000043835

19845623 - 19882739

37117