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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20028935_20036891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20028935 - 20036891

Intron Length:

7957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTGACATCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTTTTTGACA

Flanking Amino Acid:

QELVNLRGELVTTSAACEKL

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

70.2

0.46

0.9

66.7

39.5

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

79.3

0.92

85.48

26.3

Associated Gene:

Gene:

MTUS1

Ensembl Gene ID:

ENSAPLG00000009766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041452

20027811 - 20044190

16380

ENSAPLT00000022729

19960700 - 20044293

83594

ENSAPLT00000010199

19996404 - 20044190

47787