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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20037727_20038688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20037727 - 20038688

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TAATTTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGGTATTAAAAA

Flanking Amino Acid:

LKKEYESSFSELKNAHESER

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

100

1.18

0.7

100

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

78.9

0.65

73.4

41.4

Minor 5ss

31.3

-2.1

50.6

45.9

Minor BPS

-0.2

1.9

58.11

41.3

Associated Gene:

Gene:

MTUS1

Ensembl Gene ID:

ENSAPLG00000009766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041452

20027811 - 20044190

16380

ENSAPLT00000022729

19960700 - 20044293

83594

ENSAPLT00000010199

19996404 - 20044190

47787