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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20038964_20041891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20038964 - 20041891

Intron Length:

2928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTCCA

5'SS Class:

major

3'SS Sequence:

GGAAATCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

CTTTGTGGAAAT

Flanking Amino Acid:

KQIAKEKANLKNPQIMYLEQ

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

66.3

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

64.8

0.33

1.1

58.7

46.7

Minor 5ss

37.1

-1.5

2.9

48.7

41.1

Minor BPS

42.1

-0.5

2.4

65.38

45.3

Associated Gene:

Gene:

MTUS1

Ensembl Gene ID:

ENSAPLG00000009766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010199

19996404 - 20044190

47787

ENSAPLT00000041452

20027811 - 20044190

16380

ENSAPLT00000022729

19960700 - 20044293

83594