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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20042009_20043002_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20042009 - 20043002

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

TTTGGTTTAAAC

Flanking Amino Acid:

DIKLMKMEKLVENNTILMDK

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

72.4

0.56

79.3

29.5

Major PPT

73.9

0.54

78.5

33.7

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

55.8

0.16

70.99

40.7

Associated Gene:

Gene:

MTUS1

Ensembl Gene ID:

ENSAPLG00000009766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010199

19996404 - 20044190

47787

ENSAPLT00000041452

20027811 - 20044190

16380

ENSAPLT00000022729

19960700 - 20044293

83594