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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20050444_20055573_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20050444 - 20055573

Intron Length:

5130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAA

U12 Branch Point Sequence:

TTTCTTTTAAAC

Flanking Amino Acid:

NFSWQYPGQESERPVIIQNF

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

74.9

0.62

67.3

39.2

Major PPT

79.5

0.66

0.9

77.4

34.7

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

68.8

0.57

1.3

76.65

32.7

Associated Gene:

Gene:

PDGFRL

Ensembl Gene ID:

ENSAPLG00000009881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040803

20049644 - 20058139

8496

ENSAPLT00000010291

20049268 - 20058139

8872