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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20078468_20081366_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20078468 - 20081366

Intron Length:

2899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGCATTTTATTT

Flanking Amino Acid:

AATLTAGVISAVMAFLFDLK

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

74.1

37.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

92.6

0.96

0.5

92.8

16.9

Minor 5ss

46.6

-0.3

2.8

62.9

42.7

Minor BPS

49.6

0.05

1.6

64.26

Associated Gene:

Gene:

SLC7A2

Ensembl Gene ID:

ENSAPLG00000010063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043004

20074287 - 20103703

29417

ENSAPLT00000020927

20074287 - 20094997

20711